CodeBase Optimizer - Secure MCP Server by ALMC Security 2025

CodeBase Optimizer

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CodeBase Optimizer MCP Tool

A sophisticated Model Context Protocol (MCP) server that provides comprehensive codebase analysis, optimization, and duplicate detection capabilities for Claude Code.

Features

🔍 Comprehensive Analysis

  • Project structure and architecture detection
  • Cross-language code duplication detection
  • Microservices architecture validation
  • Configuration optimization analysis
  • Security and performance insights

🤖 AI-Powered Learning

  • Pattern recognition that improves with each use
  • Project-specific recommendations
  • Historical analysis tracking
  • Custom rule learning

🚀 Zero Setup Required

  • Integrates directly with Claude Code
  • No additional installations needed
  • Works with any programming language
  • Portable across all projects

Available Tools

Individual Analysis Functions

  1. analyze_project_structure - Analyze project organization and architecture
  2. detect_code_duplicates - Find duplicate code across multiple languages
  3. validate_microservices_architecture - Validate microservices patterns
  4. optimize_configurations - Analyze configuration management
  5. generate_improvement_report - Generate comprehensive actionable report

Master Orchestrator Function

  1. run_complete_project_analysis - 🎯 ONE-COMMAND COMPLETE ANALYSIS
    • Runs all analyses in optimal order
    • Provides prioritized action plan
    • Generates health score and improvement roadmap

Installation & Setup

1. Install Dependencies

pip install mcp sqlite3

2. Add to Claude Code MCP Configuration

Add this to your Claude Code MCP configuration:

{
  "mcpServers": {
    "codebase-optimizer": {
      "command": "python",
      "args": ["/Users/liadgez/Documents/codebase-optimizer-mcp/server.py"],
      "env": {
        "PYTHONPATH": "/Users/liadgez/Documents/codebase-optimizer-mcp"
      }
    }
  }
}

3. Restart Claude Code

The tool will be automatically available in all Claude Code sessions.

Usage Examples

Quick Project Health Check

Use run_complete_project_analysis with path "/path/to/your/project"

Focused Duplicate Detection

Use detect_code_duplicates with path "/path/to/project" and languages ["python", "javascript"]

Microservices Validation

Use validate_microservices_architecture with path "/path/to/microservices/project"

Comprehensive Report

Use generate_improvement_report with path "/path/to/project"

Output Examples

Health Score Dashboard

Health Score: 87/100
- Organization Score: 0.9/1.0
- Duplication: 3.2%
- Security Score: 0.95/1.0

Prioritized Recommendations

🔴 HIGH: Address security issues in configuration files
🟡 MEDIUM: Consolidate 12 duplicate functions into shared modules  
🟢 LOW: Standardize naming conventions across directories

Action Plan

Phase 1: Critical Issues (1-2 days)
- Fix environment variable exposure
- Remove hardcoded secrets

Phase 2: Improvements (3-5 days)  
- Refactor duplicate code blocks
- Standardize API error handling

Supported Languages

  • Python (.py)
  • JavaScript (.js)
  • TypeScript (.ts)
  • Java (.java)
  • Go (.go)
  • Rust (.rs)
  • C/C++ (.c, .cpp)
  • PHP (.php)
  • Ruby (.rb)

Learning & Improvement

The tool automatically:

  • Learns patterns from each project analyzed
  • Builds knowledge database of common issues
  • Improves recommendations based on past successes
  • Adapts to your specific coding patterns

Troubleshooting

Common Issues

Tool not appearing in Claude Code:

  • Verify MCP configuration path is correct
  • Restart Claude Code after adding configuration
  • Check Python dependencies are installed

Analysis fails:

  • Ensure project path exists and is accessible
  • Check that Python can read the project directory
  • Verify no permission issues on the project folder

Performance issues:

  • Large projects (>10k files) may take longer to analyze
  • Use "quick" depth for faster analysis on huge codebases
  • Pattern database improves performance over time

Technical Details

Architecture

  • Engine: Sophisticated analysis engine with ML pattern recognition
  • Database: SQLite for pattern learning and improvement tracking
  • MCP Server: Standards-compliant Model Context Protocol implementation
  • Extensibility: Plugin system for custom analyzers

Data Storage

  • Pattern database stored in codebase_patterns.db
  • No sensitive data stored - only patterns and metrics
  • Database grows smarter with each project analyzed

Contributing

To extend the tool:

  1. Add new analyzers to codebase_optimizer_engine.py
  2. Expose new functions in server.py
  3. Update tool schema for new parameters
  4. Test with various project types

License

MIT License - Feel free to use and modify for your projects.


Made with ❤️ for better codebases everywhere

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